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Comparative Search for taxonomic groups

Comparative Search Help

Select organisms / genes:  ? 

 
Organisms: Genes:

Include only shared genes among all organisms

(Please, select at least one organism or taxonomic group from the lists above. You can also restrict the search to specific genes, or average only those genes shared among all the organisms included in the query)
 
   

Select diversity parameters:  ? 

 
Polymorphism:

Synonymous polymorphism*: Non-synonymous polymorphism*: Codon bias*:

(Please, select the diversity values you want to compare.)
* Synonymous and Non-synonymous polymorphisms and Codon bias are estimated on CDSs only.
 

 

Filter for degree of confidence on the polymorphic set:  ? 

 

QUALITY OF THE ALIGNMENTS

Num. of sequences 
Perc. gaps / ambiguous
bases 
<  %
Perc. difference in seqs.
length
 <  %

Exclude alignments with less than analyzed sites.

(Please, enter any of these values (no decimals). No entry means no restriction)
 

DATA SOURCE CONFIDENCE

Existence in NCBI PopSet Consecutive GenBank Accession numbers One or more
shared references
Journals: Genetics, Mol.Biol.Evol., J.Mol.Evol., Mol.Phylogenet.Evol)
 

 

 

Advanced Options:  ? 

   
 REGIONS TO BE DISPLAYED

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CDS
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5ŽUTR
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Promoters
   
   


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