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Graphical Search for polymorphic sets

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Select organisms / genes:  ? 

 
Organisms: Genes:
(Please, select organisms / genes from the lists above. No entry means all organisms / genes. Example: Drosophila simulans, Drosophila buzzatii, Drosophila yakuba)
 
   

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NUCLEOTIDE POLYMORPHISM
 
SYNONYMOUS AND NON-SYNONYMOUS POLYMORPHISMS*
 
LINKAGE DISEQUILIBRIUM*
 
CODON BIAS*

* Synonymous and Non-synonymous polymorphisms and Codon bias are estimated on CDSs only, and Linkage disequilibrium on exons and introns.
 

 

Filter for degree of confidence on the polymorphic set:  ? 

 

QUALITY OF THE ALIGNMENTS

Num. of sequences 
Perc. gaps / ambiguous
bases 
<  %
Perc. difference in seqs.
length
 <  %

Exclude alignments with less than analyzed sites.

(Please, enter any of these values (no decimals). No entry means no restriction)
 

DATA SOURCE CONFIDENCE

Existence in NCBI PopSet Consecutive GenBank Accession numbers One or more
shared references
Journals: Genetics, Mol.Biol.Evol., J.Mol.Evol., Mol.Phylogenet.Evol)
 

 

 

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DGM UAB